Nagasaki to Tokyo runs about 48 times a day, with the first departure around 06:09 and the last around 20:45. One passenger pays between €83.92 and €97.49, every fee included, depending on the operator and the way you travel. The fastest door to door is 4h 49m over 987 km, on services run by 6 operators across 1 mode.
What one seat costs
The spread between the cheapest and dearest typical fare on this corridor, across 6 operators and 1 way of making the journey. The operator sets the price on the day.
Typical fares
€83.92 to €97.49
- 153%Moves across the booking window
When it runs, leaving Nagasaki
No operator has filed a timetable for this direction yet, so the first and last departure below follow the pattern of the corridor. Read them as the shape of the service day rather than as times to turn up for.
- 06:09First departure
- 20:45Last departure
- 48Services per day
- 100%Run direct
Fares by date
What this journey usually costs, by departure date. It shows which days run dearer.
Typical fares
- about €171.83Mon14
- about €148.82Tue15
- about €155.31Wed16
- about €159.44Thu17
- about €148.82Fri18
- about €152.36Sat19
- about €140.56Sun20
- about €99.85Mon21
- about €97.49Tue22
- about €104.57Wed23
- about €129.35Thu24
- about €119.91Fri25
- about €122.86Sat26
- about €114.60Sun27
- about €85.69Mon28
- about €83.92Tue29
- about €88.05Wed30
- about €103.39Thu1
- about €94.54Fri2
- about €96.31Sat3
- about €89.82Sun4
Based on what this route has cost recently. The operator sets the price on the day, and the live fare is confirmed when you book.
The flight gets you into Tokyo. It does not get you a bed, and neither do we.
A room in Tokyo for the night the flight gets in
Sort by distance from Tokyo Station and you can see which places are ten minutes on foot and which are not.
Search Tokyo on Trip.comOr compare on Booking.com
Partner links. We do not sell accommodation. We earn a commission when a booking completes, and it never changes what you pay.
When to book Nagasaki to Tokyo
The same search run across the whole booking window, so the shape of the curve is visible rather than described.
- €100.4490 days
- €83.9260 days
- €72.1245 days
- €67.9930 days
- €89.8221 days
- €114.6014 days
- €140.567 days
- €155.313 days
- €171.831 days
- Cheapest lead time
- Fares bottom out around 30 days ahead, at €67.99.
- How much it moves
- The gap between the cheapest and dearest lead time is 153 percent. The dearest point is €171.83, 1 days out.
- What that means
- Today sits inside the cheap window, which closes about 30 days before departure. Waiting from here has usually cost money on this corridor rather than saved it.
Book now Fares on this route are lowest around 30 days ahead. You are inside that window.
This corridor, specifically
Facts that apply to Nagasaki to Tokyo and to no other route on the site.
Clocks
Both ends keep the same time, so the arrival is the departure plus the journey.
The shape of it
987 km
959 km as the crow flies, 3% further by the route services actually take. The bearing runs north-east.
Who lives at each end
409,118 → 9,733,276
Population at the departure city and at the arrival city, which is usually what decides how often anything runs.
How we know
Observed
Every operator on this corridor is named in a carrier record.
The route
What the journey actually looks like
Direct or connecting, how far the route really runs, and what happens when a connection is missed.
- How far it really runs
- The route covers 987 km against 959 km in a straight line, a detour of 3 percent. Track and road geometry account for the difference.
Who runs this route
The flight gets in hours before any room is ready. Holding a bag is not what we sell.
Left luggage near Tokyo Station
Most of the points near Tokyo Station open before the first train and shut after the last one.
Check Tokyo on StasherOr try Bounce
Partner links. We do not run these networks. We earn a commission on a booking, and the price is the same as going direct.
Questions about Nagasaki to Tokyo
The questions people actually ask about this journey, answered from the same prices and times the page above is built on rather than written once and left to go stale.
How long does it take to get from Nagasaki to Tokyo?
The fastest journey from Nagasaki to Tokyo takes 4h 49m door to door, of which 1h 39m is spent moving, on the flight. Most services take around 4h 55m, because that average includes slower stopping services and journeys with a connection. Times include reaching the terminal and leaving it at the far end.
How much does it cost to travel from Nagasaki to Tokyo?
The cheapest fare from Nagasaki to Tokyo is €83.92, as of 13 September 2026. A typical fare across the next three weeks is €140.56. Both figures are the total for one passenger, including taxes, supplier fees and our service fee, so nothing is added at checkout.
What is the cheapest way to get from Nagasaki to Tokyo?
The cheapest way from Nagasaki to Tokyo is by flight, at €97.49 for one passenger on 29 September 2026. That journey takes 4h 49m door to door. Cheaper is rarely faster on this corridor, and the comparison table on this page shows what each mode costs against what it saves.
When should I book Nagasaki to Tokyo?
Fares from Nagasaki to Tokyo bottom out around 30 days before departure, at €67.99. Across the whole booking window the gap between the cheapest and the dearest lead time is 153 percent, measured on 13 September 2026. Booking inside the last week has consistently cost more on this corridor.
Which day of the week is cheapest for Nagasaki to Tokyo?
Tuesday is the cheapest day to depart from Nagasaki to Tokyo, at €97.49. That is the median of 21 priced departure days across the next three weeks, as of 13 September 2026. Shifting a departure by one day is usually worth more than shifting the booking by one week.
Which month is cheapest for Nagasaki to Tokyo?
February is the cheapest of the next 6 months to travel from Nagasaki to Tokyo, at €66.81 for one passenger. Each month is priced on its fifteenth, so the comparison is like for like rather than a mix of weekends and midweek departures.
Who runs services from Nagasaki to Tokyo?
6 operators sell services from Nagasaki to Tokyo across 1 mode: All Nippon Airways, Japan Airlines Domestic, JetStar Japan, Peach, Skymark Airlines, Solaseed Air. Journey times, fares and fare conditions differ between them, and the operator table on this page compares all of them on speed, flexibility and what is provided on board.
Is there a direct service from Nagasaki to Tokyo?
Every service we sell from Nagasaki to Tokyo is direct, with around 48 departures a day and a fastest journey of 4h 49m door to door. No connection is needed, so there is no missed connection risk to plan around on this corridor.
Which station or terminal do services from Nagasaki to Tokyo use?
Services from Nagasaki to Tokyo by flight leave from Nagasaki NGS and arrive at Tokyo HND. Allow about 3h 10m in total for reaching the departure terminal and leaving the arrival one, which is already included in every door to door time on this page.
Can I change or refund a ticket from Nagasaki to Tokyo?
0 of the 6 operators we sell from Nagasaki to Tokyo allow a change or a refund. A change on a changeable fare costs €5.00. The operator table on this page names which is which, and the condition is shown again before you pay.
Where these numbers come from
Places, coordinates, operators, which operator serves which pair, and every distance on this page are real and come from open data. Where a corridor has a filed timetable the departure times are real too, and ferry fares are the prices the operators publish themselves.
Observed service A carrier record shows this named operator serving this named pair, and we carry that through unchanged.
Where no operator publishes a fare for a corridor, the price here is our own estimate, worked out from the real distance and the real operator through a fare curve that follows lead time, day of the week and season. It tells you roughly what the journey costs. It is not a seat anyone has agreed to sell, and the payment step will not take it.
Defined in full at Door to door, Fares, The booking window, Carbon, Distances
- On this page
- Every figure above was computed for Nagasaki to Tokyo on 13 September 2026: 987 km of route against 959 km in a straight line, 48 services a day, 6 operators a cheapest fare of €83.92, and 4h 49m door to door on the fastest mode. The return direction is computed separately and its numbers are not these numbers.
Being on the water gives Tokyo a set of days out that do not start at a station. We do not sell those either.
Day trips out of Tokyo and across Japan
Day trips that leave Tokyo in the morning and cover a good part of Japan by evening.
See Tokyo on KlookOr browse GetYourGuide
Partner links. We do not sell tours or tickets. We earn a commission on a booking, and it never changes the price.
The two ends, compared
Nagasaki reaches 28 places in 3 countries on services we hold, over distances from 49 to 959 km. Tokyo reaches 182 places in 46 countries, from 40 to 11,307 km.
Other ways to make this journey
Leaving Nagasaki
- 28Places you can leave for
- 3Countries
- 10Operators
Arriving in Tokyo
Leaving Tokyo
- 182Places you can leave for
- 46Countries
- 110Operators